ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 57.00 0.14 0.37 100.0 MT-TY-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 13529.00 33.26 87.03 100.0 MT-TY-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 528.00 1.30 3.40 100.0 MT-TY-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 53.00 64.63 0.34 100.0 MT-TD-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 209.00 0.61 1.34 100.0 MT-TK-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 27.00 0.08 0.17 100.0 MT-TK-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 5103.00 14.96 32.83 100.0 MT-TK-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 25838.00 75.76 166.22 100.0 MT-TK-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 138.00 4.42 0.89 100.0 MT-TS2-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 165.00 5.29 1.06 100.0 MT-TS2-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 421.00 13.49 2.71 92.12 MT-TS2-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 206.00 17.68 1.33 100.0 MT-TL2-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 216.00 0.07 1.39 72.24 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 83.00 0.03 0.53 41.71 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 29.00 0.01 0.19 100.0 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 253844.00 84.91 1633.03 92.28 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 201.00 0.07 1.29 100.0 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 49.00 0.02 0.32 100.0 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 208.00 0.07 1.34 74.55 MT-TE-201 Mt tRNA sigmoid colon (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 11.00 44.00 0.07 100.0 MIR196A1-201 miRNA sigmoid colon (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 322.00 30.55 2.07 100.0 MT-RNR1-201 Mt rRNA sigmoid colon (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 63.00 76.83 0.41 100.0 MIR454-201 miRNA sigmoid colon (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 109.00 74.66 0.70 100.0 MIR501-201 miRNA sigmoid colon (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 872.00 90.64 5.61 100.0 MIR769-201 miRNA sigmoid colon (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 293.00 73.80 1.88 100.0 KRTAP19-1-201 protein coding sigmoid colon (Tissue)