ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 22188.00 82.09 203.80 93.2 RACK1-230 retained intron mesendoderm (In vitro differentiated cells)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 105.00 5.29 0.96 100.0 RNA5SP486-201 rRNA pseudogene mesendoderm (In vitro differentiated cells)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1165.00 87.01 10.70 100.0 SCARNA5-201 scaRNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 48.00 0.22 0.44 57.14 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 1061.00 4.91 9.75 64.23 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 6.00 0.03 0.06 100.0 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 1786.00 8.27 16.40 100.0 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 758.00 3.51 6.96 98.83 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 8.00 0.04 0.07 100.0 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 709.00 3.28 6.51 100.0 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 8.00 0.04 0.07 100.0 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 11594.00 53.66 106.49 95.15 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 57.00 0.26 0.52 78.08 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 1.00 0.00 0.01 100.0 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 177.00 0.82 1.63 35.12 RNY4-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 29.00 52.73 0.27 90.62 MIR3142HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 140.00 20.35 1.29 100.0 SNHG6-204 retained intron mesendoderm (In vitro differentiated cells)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 71664.00 30.29 658.25 100.0 MIR151A-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 140600.00 59.42 1291.44 87.54 MIR151A-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2141.00 98.98 19.67 100.0 DENND3-221 protein coding mesendoderm (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 1129.00 10.52 10.37 100.0 WDR74-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 4.00 0.04 0.04 100.0 WDR74-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 49.00 0.46 0.45 80.33 WDR74-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 5.00 0.05 0.05 100.0 WDR74-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 7.00 0.07 0.06 50.0 WDR74-204 protein coding mesendoderm (In vitro differentiated cells)