ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 63.00 0.99 0.58 100.0 RPL7A-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 1900.00 29.99 17.45 92.64 RPL7A-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 1781.00 28.11 16.36 100.0 RPL7A-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 12.00 0.56 0.11 8.51 RN7SL2-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 371.00 24.95 3.41 99.73 NOP56-217 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 356.00 23.94 3.27 99.72 NOP56-217 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 232.00 1.35 2.13 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 6.00 0.03 0.06 7.89 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 1395.00 8.12 12.81 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 78.00 0.45 0.72 100.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 70.00 0.41 0.64 92.11 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 9133.00 53.14 83.89 99.42 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 14.00 0.08 0.13 70.0 RABGGTB-213 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 1361.00 23.08 12.50 100.0 GNL3-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 2094.00 35.51 19.23 100.0 GNL3-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 2288.00 71.97 21.02 100.0 RPL5-205 retained intron mesendoderm (In vitro differentiated cells)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 22.00 0.69 0.20 100.0 RPL5-205 retained intron mesendoderm (In vitro differentiated cells)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 1183.00 5.03 10.87 100.0 ZBED9-AS1-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 511.00 38.42 4.69 100.0 RPS3A-206 retained intron mesendoderm (In vitro differentiated cells)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 2758.00 56.38 25.33 100.0 COX7C-203 protein coding mesendoderm (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 10462.28 52.20 96.10 63.97 RACK1-229 protein coding mesendoderm (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 5449.17 27.19 50.05 32.9 RACK1-229 protein coding mesendoderm (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 294.00 1.47 2.70 40.27 RACK1-229 protein coding mesendoderm (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 7.00 0.03 0.06 100.0 RACK1-229 protein coding mesendoderm (In vitro differentiated cells)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 22188.00 82.09 203.80 93.2 RACK1-230 retained intron mesendoderm (In vitro differentiated cells)