ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 32825.00 28.07 301.50 96.7 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 656.00 0.56 6.03 100.0 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2507.00 2.14 23.03 66.98 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 24.00 0.02 0.22 100.0 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 4752.00 4.06 43.65 90.88 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 686.00 0.59 6.30 96.48 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 3938.00 3.37 36.17 100.0 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 1439.00 1.23 13.22 51.41 EIF4A2-219 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 1514.00 75.93 13.91 100.0 RPS8-207 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 23.00 0.46 0.21 100.0 RPL7A-206 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 2893.00 57.45 26.57 100.0 RPL7A-206 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 833.00 16.54 7.65 100.0 RPL7A-206 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 14574.00 32.77 133.87 99.59 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 1314.00 2.95 12.07 100.0 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 21952.00 49.36 201.63 96.82 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1913.00 4.30 17.57 100.0 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 131.00 0.29 1.20 100.0 RPL21-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1229.00 33.10 11.29 100.0 GABRE-209 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 642.00 2.68 5.90 97.72 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 387.00 1.61 3.55 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 155.00 0.65 1.42 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 8.00 0.03 0.07 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 3.00 0.01 0.03 27.27 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 11769.00 49.09 108.10 99.34 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 1.00 0.00 0.01 100.0 RPL13A-212 retained intron mesendoderm (In vitro differentiated cells)