ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 67.00 37.02 0.44 100.0 SNORD114-9-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 3533.00 57.86 23.40 100.0 Y_RNA.234-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 969.00 2.27 6.42 100.0 RNA5SP141-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 19.00 54.29 0.13 100.0 SNORD114-15-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 5413.00 80.32 35.86 100.0 ENST00000364722 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 27.00 0.29 0.18 100.0 SNORD52-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2.00 0.23 0.01 66.67 SNORD117-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 1.00 0.12 0.01 33.33 SNORD117-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 4.00 30.77 0.03 100.0 SNORD114-3-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 1.00 7.69 0.01 100.0 SNORD114-3-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 121.00 0.70 0.80 100.0 RNA5SP298-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 79.00 2.83 0.52 100.0 SNORD38A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1491.00 53.44 9.88 100.0 SNORD38A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 301.00 10.79 1.99 100.0 SNORD38A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 61.00 11.51 0.40 96.83 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 2.00 0.38 0.01 100.0 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 11.00 2.08 0.07 84.62 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 3.00 0.16 0.02 100.0 RNA5SP77-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 142.00 55.91 0.94 100.0 SNORD114-22-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 303.00 4.87 2.01 100.0 SNORD6-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1718.00 27.60 11.38 100.0 SNORD6-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6044.39 21.13 40.04 43.46 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 7308.00 25.55 48.41 100.0 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 476.00 1.66 3.15 100.0 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 33.00 0.12 0.22 89.19 SNORD82-201 snoRNA trophoblast cell (In vitro differentiated cells)