ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1.00 0.06 0.01 50.0 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 92.00 3.30 0.61 100.0 SNORD104-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 1865.00 18.20 12.35 69.77 RNA5SP358-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 734.00 1.40 4.86 85.85 RNA5SP145-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 2.00 6.25 0.01 100.0 Y_RNA.105-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 2.00 0.13 0.01 100.0 RNY4P9-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 35.00 7.66 0.23 100.0 RNU5B-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1.00 0.22 0.01 100.0 RNU5B-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 1.00 10.00 0.01 100.0 SNORD115-18-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 2.00 0.09 0.01 66.67 RNY4P27-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 30.00 1.41 0.20 96.77 RNY4P27-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 241.00 10.26 1.60 100.0 Y_RNA.136-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 129.00 16.17 0.85 100.0 Y_RNA.181-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1047.00 5.60 6.94 100.0 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 4438.51 23.74 29.40 73.59 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 919.79 4.92 6.09 25.28 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 2.00 0.01 0.01 100.0 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 308.00 0.83 2.04 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 1.60 0.00 0.01 26.66 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 70.00 0.19 0.46 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 3.44 0.01 0.02 57.29 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 26.00 0.07 0.17 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 237.00 0.64 1.57 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1368.00 3.68 9.06 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1455.43 3.92 9.64 44.6 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)