ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 14384.00 0.61 95.28 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 36509.00 1.55 241.84 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 943.00 0.04 6.25 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 24113.00 1.02 159.73 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 43272.00 1.84 286.64 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 42487.00 57.85 281.44 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 3004.00 4.09 19.90 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 58.00 0.08 0.38 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 14.00 0.02 0.09 73.68 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 20504.00 27.92 135.82 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 291.00 2.98 1.93 98.64 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 6462.00 66.20 42.81 100.0 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 5.00 0.05 0.03 100.0 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 511.00 5.23 3.38 100.0 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 100.00 54.95 0.66 100.0 B4GALT1-203 nonsense mediated decay trophoblast cell (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 278.00 2.08 1.84 100.0 ENST00000722183 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 6080.00 45.55 40.28 89.36 ENST00000722183 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1162.00 8.71 7.70 100.0 ENST00000722183 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 6229.00 94.51 41.26 100.0 MIR34BHG-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 23809.00 75.44 157.72 80.8 THBS3-AS1-228 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 5380.00 24.15 35.64 100.0 MIR200CHG-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 7925.00 35.57 52.50 100.0 MIR200CHG-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 982.00 44.72 6.50 100.0 SNHG16-266 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 301.00 13.71 1.99 100.0 SNHG16-266 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 36.00 1.64 0.24 100.0 SNHG16-266 lncRNA trophoblast cell (In vitro differentiated cells)