ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 3570.00 1.62 23.65 100.0 MIR222HG-206 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 61843.00 19.58 409.66 97.6 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 37.00 0.01 0.25 100.0 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 5271.00 1.67 34.92 44.12 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 13612.22 4.31 90.17 50.76 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 6676.00 2.11 44.22 68.36 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 12801.47 4.05 84.80 54.34 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 85204.00 26.98 564.41 100.0 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 77137.00 24.42 510.97 89.24 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 8.00 0.00 0.05 100.0 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 15485.00 4.90 102.58 33.83 MIR302CHG-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 64.00 13.94 0.42 100.0 RPSA-216 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 26.00 89.66 0.17 100.0 MIR99AHG-370 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1.00 3.45 0.01 100.0 MIR99AHG-370 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 14681.00 98.61 97.25 100.0 HPS4-237 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 23.00 53.49 0.15 100.0 MEG8-253 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 4.00 16.67 0.03 100.0 MEG9-206 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 2.00 8.33 0.01 100.0 MEG9-206 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 2.00 8.33 0.01 100.0 MEG9-206 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 5845.00 12.57 38.72 100.0 DNAJC5-203 nonsense mediated decay trophoblast cell (In vitro differentiated cells)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 573.00 5.50 3.80 100.0 ENST00000707189 TEC trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 643711.05 27.35 4264.08 29.77 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 2.00 0.00 0.01 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 1516118.62 64.41 10043.09 71.2 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 7672.00 0.33 50.82 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)