ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 82.00 0.50 0.54 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 6293.00 38.38 41.69 58.26 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 21.00 0.65 0.14 100.0 MIRLET7A1HG-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 770.00 7.98 5.10 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 4.00 0.04 0.03 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 468.00 4.85 3.10 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 1196.00 12.39 7.92 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 44.00 0.46 0.29 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 16.00 0.17 0.11 100.0 SNHG29-232 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 2.00 0.01 0.01 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 7.00 0.05 0.05 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1038.00 6.90 6.88 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 1.00 0.01 0.01 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 2.00 0.01 0.01 100.0 SNHG14-234 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1.00 0.04 0.01 12.5 ENST00000655317 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 19.00 0.80 0.13 100.0 ENST00000655317 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 9.00 0.38 0.06 90.0 ENST00000655317 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 390.00 3.70 2.58 49.3 LINC01962-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 4042.00 38.30 26.78 100.0 LINC01962-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 686.00 6.50 4.54 100.0 LINC01962-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 4.00 0.06 0.03 100.0 SNHG14-241 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 2.00 0.05 0.01 66.67 SNHG14-261 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 2.00 0.11 0.01 100.0 LIMD1-AS1-204 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 23.00 1.26 0.15 88.46 LIMD1-AS1-204 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 366.00 42.81 2.42 96.32 MIR99AHG-262 lncRNA trophoblast cell (In vitro differentiated cells)