ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 33374.00 10.82 221.08 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 8.00 0.00 0.05 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 4.00 0.00 0.03 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 135.00 0.04 0.89 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 1807.00 0.59 11.97 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 403.00 0.13 2.67 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 49.00 0.02 0.32 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 2.00 0.00 0.01 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1249.00 1.71 8.27 100.0 FTX-219 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 55953.00 76.59 370.64 92.88 FTX-219 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 1402.00 4.46 9.29 18.7 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 2.00 0.01 0.01 66.67 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 83.00 0.26 0.55 24.06 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 1.00 0.00 0.01 33.33 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 15413.00 49.08 102.10 96.76 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 8.00 0.03 0.05 100.0 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 389.00 1.24 2.58 100.0 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 1314.00 4.18 8.70 100.0 CTC1-214 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 636.00 3.88 4.21 71.54 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 186.00 1.13 1.23 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 7.00 0.04 0.05 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 536.00 3.27 3.55 80.12 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 96.00 0.59 0.64 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 6.00 0.04 0.04 100.0 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4999.00 30.49 33.11 66.31 ENST00000651540 lncRNA trophoblast cell (In vitro differentiated cells)