ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 5.00 0.04 0.03 100.0 SNHG14-224 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 829.00 7.16 5.49 100.0 SNHG14-224 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 2.00 0.02 0.01 50.0 SNHG14-224 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 122.00 1.05 0.81 81.33 SNHG14-224 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 106.00 0.92 0.70 58.89 SNHG14-224 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1686.61 20.30 11.17 65.7 5S_rRNA.20-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 4.00 0.38 0.03 100.0 HSPA9-211 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 17.00 1.63 0.11 100.0 HSPA9-211 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 550.00 81.24 3.64 100.0 DNM3OS-205 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 50.00 0.02 0.33 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 102.00 0.03 0.68 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 2064.00 0.67 13.67 99.33 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 7184.00 2.33 47.59 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 121.00 0.04 0.80 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 448.00 0.15 2.97 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 15691.00 5.09 103.94 99.49 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 4190.00 1.36 27.76 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 51712.00 16.76 342.55 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 32039.00 10.39 212.23 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 6106.00 1.98 40.45 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 96495.00 31.28 639.20 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 2702.00 0.88 17.90 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 184.00 0.06 1.22 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1558.00 0.51 10.32 100.0 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 5541.00 1.80 36.70 69.99 GAS5-230 retained intron trophoblast cell (In vitro differentiated cells)