ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 2109.00 4.30 13.97 100.0 RNA5-8SN2-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 6.00 0.01 0.04 46.15 RNA5-8SN2-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 2354.30 4.80 15.60 44.43 RNA5-8SN2-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 3588.00 95.94 23.77 100.0 MIR7974-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 1.00 20.00 0.01 100.0 MIR376A1-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 2969.00 15.32 19.67 100.0 U2.3-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 2.00 0.01 0.01 100.0 U2.3-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 0.80 0.00 0.01 80.1 U2.3-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 40.00 0.21 0.26 100.0 U2.3-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 16.00 0.08 0.11 100.0 U2.3-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 343.00 4.40 2.27 100.0 U2.6-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1.00 0.34 0.01 100.0 ENST00000619323 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 182.00 61.28 1.21 100.0 ENST00000619323 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 269.00 26.77 1.78 100.0 SCARNA4-202 scaRNA trophoblast cell (In vitro differentiated cells)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 6981.00 82.26 46.24 100.0 ENST00000630615 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 45.00 27.95 0.30 100.0 DMRT2-209 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 52.00 32.30 0.34 100.0 DMRT2-209 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 815.00 80.61 5.40 100.0 SNORD98-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4.00 0.40 0.03 100.0 SNORD98-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 587230.04 26.89 3889.94 28.22 MIR106AHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 4940.27 0.23 32.73 49.22 MIR106AHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 1161.00 0.05 7.69 100.0 MIR106AHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 4555.62 0.21 30.18 45.39 MIR106AHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 5.00 45.45 0.03 100.0 MEG8-222 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 2.00 0.02 0.01 66.67 SNHG14-224 lncRNA trophoblast cell (In vitro differentiated cells)