ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1352.00 55.41 8.96 100.0 SNORD17-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 2.00 0.06 0.01 100.0 SNORD72-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 655.00 20.17 4.34 99.39 RNY4P18-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 6.00 1.16 0.04 100.0 SNORD90-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 1.00 0.19 0.01 100.0 SNORD90-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 1974.00 21.55 13.08 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 501.00 5.47 3.32 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 360.00 3.93 2.38 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2442.00 26.66 16.18 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 7169.00 77.14 47.49 82.34 B4GALNT2-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 1.00 0.01 0.01 100.0 B4GALNT2-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 9205.00 91.29 60.98 100.0 NDE1-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 1.00 100.00 0.01 100.0 MIR208B-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 292.00 38.57 1.93 100.0 MIR450B-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 1122.00 65.58 7.43 100.0 MIR887-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 34.00 91.89 0.23 100.0 MIR889-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 2.00 0.90 0.01 100.0 SNORD111-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 3.00 0.29 0.02 75.0 SNORD88A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 3540.00 97.47 23.45 100.0 MIR548K-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 616.00 47.02 4.08 100.0 MIR320B2-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 63.00 85.14 0.42 100.0 MIR1271-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 936.00 10.35 6.20 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 1154.00 12.76 7.64 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2591.00 28.64 17.16 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 183.00 2.02 1.21 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)