ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 204.00 0.28 1.15 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 599.00 5.60 3.37 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 54114.00 79.95 304.40 93.48 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 119.00 1.19 0.67 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 59.00 1.17 0.33 42.14 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 2655.00 52.63 14.93 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 967.00 19.17 5.44 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 20.00 0.40 0.11 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 106.00 0.00 0.60 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 10456.00 61.01 58.82 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 132.00 10.27 0.74 65.02 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 71.00 5.53 0.40 34.98 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 407.00 4.80 2.29 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 6.00 0.07 0.03 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 12845.00 89.45 72.26 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 176.00 32.71 0.99 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1115.00 63.50 6.27 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 130.00 0.25 0.73 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 86.00 0.17 0.48 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 77.00 0.15 0.43 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 7677.00 14.92 43.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 422.00 0.82 2.37 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 21.00 0.04 0.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 4023.00 0.08 22.63 72.71 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 4861.00 0.09 27.34 60.85 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)