ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 770.00 6.30 4.33 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 25.00 0.23 0.14 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 37.00 0.00 0.21 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 743.00 0.02 4.18 31.15 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 2844.00 32.50 16.00 60.05 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 2882.00 32.93 16.21 50.33 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 9.00 0.08 0.05 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 160.00 0.02 0.90 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 694725.00 69.48 3907.99 92.71 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 15271.00 52.75 85.90 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 16.00 0.43 0.09 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 199.00 0.39 1.12 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 203.00 0.29 1.14 28.27 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 112.00 0.16 0.63 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 275.00 0.39 1.55 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 101.00 0.14 0.57 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1410.00 2.01 7.93 95.98 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 175.00 0.25 0.98 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 995.00 8.78 5.60 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 3627.00 32.00 20.40 49.71 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 668.00 5.98 3.76 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 90.00 0.12 0.51 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 65778.00 89.64 370.02 97.55 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 264.00 0.36 1.49 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 177.00 0.24 1.00 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)