ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 1287.00 0.12 7.24 100.0 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 24.00 26.67 0.14 100.0 C19orf48P-218 lncRNA upper lobe of left lung (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 3646.00 58.14 20.51 96.23 SNHG18-220 lncRNA upper lobe of left lung (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 179.00 8.20 1.01 100.0 ENST00000817026 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 17.00 0.21 0.10 100.0 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 557.71 6.96 3.14 25.65 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 62.60 0.78 0.35 53.96 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1550.82 19.35 8.72 67.08 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 101.79 1.27 0.57 6.23 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 274.00 3.42 1.54 78.29 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 783.52 9.78 4.41 32.85 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2144.37 26.75 12.06 77.39 ENST00000823801 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 652.00 65.40 3.67 78.65 ENST00000827714 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 177.00 17.75 1.00 21.35 ENST00000827714 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 655.00 1.00 3.68 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 33.00 0.05 0.19 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 3214.00 4.93 18.08 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 59576.00 91.31 335.13 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 107.00 84.92 0.60 100.0 MIR205HG-245 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1566.00 57.07 8.81 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 5.00 0.18 0.03 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 18.00 0.66 0.10 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 31.00 1.13 0.17 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 3097.00 89.90 17.42 100.0 ZFAS1-242 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 3561.00 60.01 20.03 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)