ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 251.00 16.89 1.41 100.0 HCN2-201 protein coding upper lobe of left lung (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 14.00 6.70 0.08 100.0 ATP5MC3-201 protein coding upper lobe of left lung (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 155.00 31.44 0.87 100.0 CDC25A-201 protein coding upper lobe of left lung (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 4491.00 84.77 25.26 100.0 RUNX3-201 protein coding upper lobe of left lung (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 543.00 45.06 3.05 100.0 BLOC1S4-201 protein coding upper lobe of left lung (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 171.00 13.81 0.96 100.0 ATAD5-201 protein coding upper lobe of left lung (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 85.00 3.32 0.48 100.0 SLITRK5-201 protein coding upper lobe of left lung (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 10.00 21.74 0.06 100.0 HASPIN-201 protein coding upper lobe of left lung (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 3063.00 99.19 17.23 100.0 ATG101-201 protein coding upper lobe of left lung (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 90.00 43.90 0.51 100.0 PRICKLE1-201 protein coding upper lobe of left lung (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 110.00 91.67 0.62 93.22 MIR133A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 1.00 4.17 0.01 100.0 PBLD-204 protein coding upper lobe of left lung (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 303330.00 83.39 1706.30 96.62 MIRLET7BHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 33947.00 9.33 190.96 83.49 MIRLET7BHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 2917.00 2.76 16.41 74.24 MIR375-201 miRNA upper lobe of left lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 102036.00 96.42 573.98 99.23 MIR375-201 miRNA upper lobe of left lung (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 6109.00 47.83 34.36 100.0 MIR30E-201 miRNA upper lobe of left lung (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 5681.00 44.48 31.96 100.0 MIR30E-201 miRNA upper lobe of left lung (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 1372.00 51.50 7.72 100.0 MIR29A-201 miRNA upper lobe of left lung (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 320.00 85.79 1.80 100.0 MIR345-201 miRNA upper lobe of left lung (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 18821.00 98.81 105.87 100.0 MIR16-2-201 miRNA upper lobe of left lung (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 3503.00 96.08 19.71 100.0 MIR340-201 miRNA upper lobe of left lung (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 7.00 0.19 0.04 100.0 MIR340-201 miRNA upper lobe of left lung (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1437.00 50.09 8.08 100.0 MIR107-201 miRNA upper lobe of left lung (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 43.00 82.69 0.24 89.58 MIR381-201 miRNA upper lobe of left lung (Tissue)