ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 1013.00 1.07 5.70 100.0 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 64532.00 67.85 363.01 77.78 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 3229.00 3.40 18.16 100.0 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 59.00 6.81 0.33 100.0 ENST00000772672 lncRNA upper lobe of left lung (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 1431.00 40.60 8.05 100.0 ENST00000773843 lncRNA upper lobe of left lung (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 99621.00 33.17 560.39 87.81 SNHG12-223 lncRNA upper lobe of left lung (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 198567.00 66.11 1116.99 99.15 SNHG12-223 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 48252.00 56.85 271.43 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 620.00 0.73 3.49 81.58 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 337.00 0.40 1.90 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 953.33 1.12 5.36 42.69 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 868.52 1.02 4.89 43.4 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1471.34 1.73 8.28 44.45 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 16654.00 19.62 93.68 88.3 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 398.00 0.47 2.24 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 3316.00 84.81 18.65 88.64 MIR155HG-205 lncRNA upper lobe of left lung (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 8.00 72.73 0.05 100.0 ENST00000784740 lncRNA upper lobe of left lung (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 59.00 0.50 0.33 100.0 ENST00000785178 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 44.00 2.49 0.25 75.86 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 460.00 26.05 2.59 100.0 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 14.00 0.79 0.08 29.17 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2195.75 4.79 12.35 43.08 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2658.95 5.80 14.96 52.17 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 22420.00 48.91 126.12 65.94 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 897008.00 86.03 5045.88 91.96 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)