ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 33.00 0.83 0.19 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 3811.00 95.95 21.44 99.56 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2455.00 0.63 13.81 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 14961.00 3.85 84.16 98.2 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2063.43 0.53 11.61 70.69 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1075.00 0.28 6.05 81.5 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 73694.00 18.97 414.55 99.64 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 774.00 0.20 4.35 77.17 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 152595.00 39.28 858.38 99.22 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 17760.00 4.57 99.90 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 8191.00 2.11 46.08 99.78 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 161.00 0.04 0.91 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 310.00 0.08 1.74 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2620.00 0.67 14.74 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 300.00 0.08 1.69 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 703.00 0.18 3.95 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 28130.00 7.24 158.24 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 110.00 0.03 0.62 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2450.00 0.63 13.78 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 37222.00 9.58 209.38 84.73 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 611.00 0.16 3.44 81.9 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 17.00 0.00 0.10 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 15.00 0.00 0.08 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 2224.00 0.57 12.51 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1350.00 0.35 7.59 86.26 SNHG1-248 lncRNA upper lobe of left lung (Tissue)