ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 3.00 0.03 0.02 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 9.00 0.09 0.05 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 12.00 0.53 0.07 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 172.00 7.55 0.97 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 319.00 1.70 1.79 100.0 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 14628.00 77.87 82.29 94.92 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1880.00 1.20 10.58 97.26 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 150575.00 95.85 847.02 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 574.00 0.37 3.23 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 469.00 91.96 2.64 100.0 MEG8-228 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 22029.00 55.16 123.92 100.0 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 4970.00 12.45 27.96 99.06 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 2145.00 53.28 12.07 83.2 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1007.00 25.01 5.66 100.0 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 52.00 56.52 0.29 88.14 MIR9-2HG-225 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 78.00 40.62 0.44 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 5.00 2.60 0.03 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 5.00 7.35 0.03 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 5.00 35.71 0.03 100.0 MEG8-240 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 3.00 5.88 0.02 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 2.00 3.92 0.01 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 153.00 9.72 0.86 100.0 ENST00000666735 lncRNA upper lobe of left lung (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 6.00 0.38 0.03 100.0 ENST00000666735 lncRNA upper lobe of left lung (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 36.00 30.25 0.20 100.0 MEG8-242 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 36.00 0.91 0.20 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)