ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 160.00 16.05 0.90 100.0 FTX-219 lncRNA upper lobe of left lung (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 614.00 61.58 3.45 91.78 FTX-219 lncRNA upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 451.00 2.31 2.54 65.08 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 163.00 0.83 0.92 83.59 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 9779.00 49.99 55.01 86.75 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 242.00 1.24 1.36 34.92 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 3136.00 16.03 17.64 59.3 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 147.00 0.75 0.83 100.0 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 568.00 2.90 3.20 100.0 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 75.00 0.38 0.42 100.0 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 515.00 1.52 2.90 83.6 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 2308.00 6.79 12.98 87.33 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 11.00 0.03 0.06 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1744.00 5.13 9.81 56.81 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 58.00 0.17 0.33 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 16.00 0.05 0.09 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 560.00 1.65 3.15 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 5872.00 17.28 33.03 56.47 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1218.00 3.58 6.85 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 14564.00 42.86 81.93 88.21 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 17003.00 2.17 95.65 100.0 MIRLET7A1HG-203 lncRNA upper lobe of left lung (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 23.00 88.46 0.13 100.0 MEG8-225 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2959.00 31.09 16.65 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 4548.00 47.78 25.58 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 461.00 4.84 2.59 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)