ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 1867.00 0.92 10.70 100.0 MIR28-201 miRNA stomach (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 2161.00 70.19 12.38 100.0 MIR183-201 miRNA stomach (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 12100.00 83.46 69.33 100.0 MIR145-201 miRNA stomach (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 842.00 5.81 4.82 100.0 MIR145-201 miRNA stomach (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 19588.00 97.27 112.24 98.92 MIR186-201 miRNA stomach (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 7894.00 77.50 45.23 100.0 MIR200B-201 miRNA stomach (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 90.00 36.59 0.52 100.0 MIR218-1-201 miRNA stomach (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 9761.00 87.14 55.93 93.73 MIR181B2-201 miRNA stomach (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1168000.00 88.59 6692.52 89.2 MIR10B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 63.00 2.60 0.36 100.0 MIR130B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 336.71 13.91 1.93 34.05 MIR130B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 1567.25 64.76 8.98 68.53 MIR130B-201 miRNA stomach (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 2120.00 16.11 12.15 100.0 MIR199A1-201 miRNA stomach (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 74.00 91.36 0.42 100.0 MIR487B-201 miRNA stomach (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 601.67 21.13 3.45 25.98 MIR93-201 miRNA stomach (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1999.37 70.20 11.46 74.19 MIR93-201 miRNA stomach (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 6546.00 75.11 37.51 79.12 MIR532-201 miRNA stomach (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 214.00 79.55 1.23 100.0 MIR15B-201 miRNA stomach (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 1949.00 84.30 11.17 100.0 MIR150-201 miRNA stomach (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 35.00 31.53 0.20 100.0 MIR542-201 miRNA stomach (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 62.00 4.26 0.36 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 1104.00 75.88 6.33 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 8078.00 4.99 46.29 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 883.00 0.55 5.06 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 41790.00 25.82 239.45 88.71 MIR30A-201 miRNA stomach (Tissue)