ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 1068.00 0.66 6.12 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 88720.00 92.04 508.36 100.0 SNORD37-201 snoRNA stomach (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 14657.00 90.29 83.98 100.0 SNORD59A-201 snoRNA stomach (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 62.00 11.59 0.36 100.0 SNORA7B-201 snoRNA stomach (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 238.00 32.25 1.36 100.0 Y_RNA.555-201 misc RNA stomach (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 51450.00 93.49 294.80 94.85 MIR25-201 miRNA stomach (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 17328.00 87.38 99.29 93.66 MIR99B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 5337.00 49.68 30.58 85.19 MIR23B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 4756.00 44.27 27.25 92.01 MIR23B-201 miRNA stomach (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 3307.00 66.33 18.95 100.0 MIR203A-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 256.00 2.30 1.47 100.0 MIR199B-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 9693.00 87.11 55.54 92.62 MIR199B-201 miRNA stomach (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 4231.00 92.60 24.24 100.0 MIR30B-201 miRNA stomach (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1369.00 93.51 7.84 100.0 MIR181D-201 miRNA stomach (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 1230.00 84.89 7.05 100.0 MIR215-201 miRNA stomach (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 1348.00 0.73 7.72 100.0 MIR181A2-201 miRNA stomach (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 113799.00 98.43 652.06 99.25 MIR191-201 miRNA stomach (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 28.00 45.90 0.16 59.57 MIR149-201 miRNA stomach (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1528.00 88.68 8.76 100.0 MIR181C-201 miRNA stomach (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 137.00 7.95 0.78 100.0 MIR181C-201 miRNA stomach (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 5106.00 77.08 29.26 100.0 MIR194-1-201 miRNA stomach (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 420.00 63.64 2.41 66.99 MIR128-2-201 miRNA stomach (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1738.00 72.30 9.96 78.82 MIR99A-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 184930.00 90.66 1059.63 93.61 MIR28-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1386.00 0.68 7.94 84.67 MIR28-201 miRNA stomach (Tissue)