ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 3897.00 13.34 22.33 67.35 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 804.21 2.75 4.61 67.47 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 6056.00 20.73 34.70 68.43 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 437.00 75.47 2.50 100.0 SNORD114-14-201 snoRNA stomach (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 769.00 0.67 4.41 100.0 SNORD104-201 snoRNA stomach (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 2638.00 2.29 15.12 100.0 SNORD104-201 snoRNA stomach (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 161353.00 65.03 924.54 77.81 RNA5SP358-201 rRNA pseudogene stomach (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 275.00 4.93 1.58 40.86 RNA5SP145-201 rRNA pseudogene stomach (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 5.00 1.45 0.03 100.0 RNY4P9-201 misc RNA stomach (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 583.00 11.00 3.34 100.0 RNU5B-1-201 snRNA stomach (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1758.00 33.18 10.07 100.0 RNU5B-1-201 snRNA stomach (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 36.00 2.35 0.21 97.3 RNY4P27-201 misc RNA stomach (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 328.00 18.72 1.88 100.0 Y_RNA.136-201 misc RNA stomach (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 8861.00 94.87 50.77 99.26 SNORD114-25-201 snoRNA stomach (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 3713.00 96.12 21.28 100.0 SNORD113-7-201 snoRNA stomach (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 117.00 23.73 0.67 100.0 Y_RNA.181-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 30.00 0.71 0.17 100.0 RNY1-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 85.00 2.02 0.49 100.0 RNY1-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 775.62 18.45 4.44 61.27 RNY1-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 425.91 10.13 2.44 45.31 RNY1-201 misc RNA stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 366.06 0.13 2.10 45.87 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 909.00 0.33 5.21 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 707.00 0.25 4.05 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 9522.00 3.43 54.56 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 19468.70 7.01 111.55 41.78 RNA5SP202-201 rRNA pseudogene stomach (Tissue)