ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 2115.89 33.86 12.12 75.33 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 825.28 13.21 4.73 29.72 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 964.00 15.43 5.52 91.46 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 73985.00 93.91 423.93 98.05 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 26.00 0.50 0.15 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1547.00 8.86 8.86 65.66 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 100.00 0.28 0.57 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 202.00 0.29 1.16 80.8 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1450.00 61.81 8.31 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 183.00 1.96 1.05 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 34377.00 87.75 196.98 97.0 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 31.00 0.14 0.18 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 11731.00 53.08 67.22 89.99 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 8.00 1.98 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 929.00 51.55 5.32 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 22.00 0.88 0.13 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 11114.00 92.61 63.68 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 185.00 92.50 1.06 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 62004.00 59.00 355.28 95.54 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 446.00 0.42 2.56 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 49.00 0.14 0.28 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2088.00 36.41 11.96 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 2327.00 21.96 13.33 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 151.00 3.24 0.87 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 205.00 4.40 1.17 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA stomach (Tissue)