ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 683452.00 37.60 3916.11 85.16 SNHG12-223 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 1130786.00 62.20 6479.29 98.59 SNHG12-223 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 103480.00 65.37 592.93 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1538.00 0.97 8.81 84.18 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 485.00 0.31 2.78 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 921.29 0.58 5.28 40.87 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1405.04 0.89 8.05 41.32 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1267.31 0.80 7.26 27.17 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 12826.00 8.10 73.49 82.94 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 256.00 0.16 1.47 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 4019.00 82.75 23.03 86.86 MIR155HG-205 lncRNA stomach (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 13.00 44.83 0.07 100.0 ENST00000784740 lncRNA stomach (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 153.00 1.53 0.88 100.0 ENST00000785178 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 877.00 16.92 5.03 92.41 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1133.00 21.86 6.49 100.0 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 72.00 1.39 0.41 17.6 ENST00000786284 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 5782.12 37.83 33.13 57.16 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4588.74 30.03 26.29 45.36 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 1514.00 9.91 8.68 77.88 ENST00000797550 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 165191.00 85.26 946.53 92.63 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 360.00 0.19 2.06 100.0 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 346.00 75.55 1.98 100.0 C19orf48P-218 lncRNA stomach (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 3989.00 68.20 22.86 98.28 SNHG18-220 lncRNA stomach (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 305.00 12.55 1.75 100.0 ENST00000817026 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 175.89 2.17 1.01 43.43 ENST00000823279 lncRNA stomach (Tissue)