ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 24.00 0.06 0.12 100.0 SNHG32-227 lncRNA spleen (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 2524.00 85.47 12.29 100.0 B4GALT1-203 nonsense mediated decay spleen (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 262.00 1.36 1.28 100.0 ENST00000722183 lncRNA spleen (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 4408.00 22.91 21.46 86.87 ENST00000722183 lncRNA spleen (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1013.00 5.26 4.93 100.0 ENST00000722183 lncRNA spleen (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 22.00 52.38 0.11 100.0 MIR34BHG-202 lncRNA spleen (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 5037.00 74.64 24.53 80.73 THBS3-AS1-228 lncRNA spleen (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 38.00 67.86 0.19 100.0 MIR200CHG-202 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 7225.00 44.88 35.18 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 293.00 1.82 1.43 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 1673.00 10.39 8.15 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 16.00 61.54 0.08 100.0 MEG8-261 lncRNA spleen (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 106.00 25.92 0.52 100.0 NR2F2-AS1-327 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 1678.00 7.21 8.17 44.95 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 12078.00 51.93 58.81 100.0 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 1166.00 5.01 5.68 41.0 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 889.00 3.82 4.33 34.63 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 1787.00 7.68 8.70 100.0 ENST00000747675 lncRNA spleen (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 37060.00 71.93 180.46 89.35 SNHG26-250 lncRNA spleen (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 1481.00 2.87 7.21 100.0 SNHG26-250 lncRNA spleen (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 531.00 26.67 2.59 100.0 LINC02422-207 lncRNA spleen (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 172.00 4.22 0.84 100.0 ENST00000753088 lncRNA spleen (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 254.00 6.24 1.24 100.0 ENST00000753088 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 4540.90 8.89 22.11 33.64 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1082.00 2.12 5.27 100.0 ENST00000756336 lncRNA spleen (Tissue)