ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 185.00 0.97 0.90 100.0 CTC1-214 protein coding spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 620.00 1.76 3.02 80.73 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 4138.00 11.73 20.15 91.87 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 31.00 0.09 0.15 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1711.00 4.85 8.33 52.92 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 74.00 0.21 0.36 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 63.00 0.18 0.31 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 73.00 0.21 0.36 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 7006.00 19.86 34.12 62.18 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 118.00 0.33 0.57 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 10137.00 28.73 49.36 80.52 ENST00000651540 lncRNA spleen (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 4563.00 0.40 22.22 100.0 MIRLET7A1HG-203 lncRNA spleen (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 842.00 87.16 4.10 100.0 MEG8-225 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 6461.00 69.44 31.46 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 1537.00 16.52 7.48 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 20.00 0.21 0.10 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 11.00 0.12 0.05 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 137.00 3.50 0.67 100.0 SNHG14-234 lncRNA spleen (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 132.00 3.38 0.64 100.0 SNHG14-234 lncRNA spleen (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 7.00 0.02 0.03 0.08 ENST00000655317 lncRNA spleen (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 352.00 1.24 1.71 100.0 ENST00000655317 lncRNA spleen (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 21561.00 75.66 104.99 89.94 ENST00000655317 lncRNA spleen (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 485.00 0.49 2.36 70.19 LINC01962-202 lncRNA spleen (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 94829.00 94.94 461.77 100.0 LINC01962-202 lncRNA spleen (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 426.00 0.43 2.07 100.0 LINC01962-202 lncRNA spleen (Tissue)