ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 34423.00 86.20 167.62 92.15 B4GALNT2-202 protein coding spleen (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 251.00 0.63 1.22 100.0 B4GALNT2-202 protein coding spleen (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 453.00 83.58 2.21 100.0 NDE1-202 protein coding spleen (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 30.00 49.18 0.15 100.0 MIR450B-201 miRNA spleen (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 50.00 29.59 0.24 100.0 MIR887-201 miRNA spleen (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 244.00 93.13 1.19 100.0 MIR889-201 miRNA spleen (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 49.00 98.00 0.24 100.0 MIR548K-201 miRNA spleen (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 331.00 61.07 1.61 100.0 MIR320B2-201 miRNA spleen (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 3.00 50.00 0.01 100.0 MIR1271-201 miRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 34753.00 85.72 169.23 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2639.00 6.51 12.85 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 155.00 0.38 0.75 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 932.00 2.30 4.54 100.0 SNORD100-201 snoRNA spleen (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 10093.00 74.27 49.15 100.0 SNORD111B-201 snoRNA spleen (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 881.00 2.59 4.29 100.0 RNU2-36P-201 snRNA spleen (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 1186.00 3.49 5.78 100.0 RNU2-36P-201 snRNA spleen (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 142955.00 96.50 696.12 99.21 SNORD19C-201 snoRNA spleen (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1950.00 1.32 9.50 100.0 SNORD19C-201 snoRNA spleen (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 5369.00 71.88 26.14 100.0 SNORD12B-201 snoRNA spleen (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 225.00 3.01 1.10 100.0 SNORD12B-201 snoRNA spleen (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 5.00 0.07 0.02 100.0 SNORD12B-201 snoRNA spleen (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 24.00 2.26 0.12 100.0 Y_RNA.609-201 misc RNA spleen (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 170.00 56.11 0.83 100.0 Y_RNA.612-201 misc RNA spleen (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 581.00 23.10 2.83 100.0 SNORD71-201 snoRNA spleen (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 231.00 9.18 1.12 100.0 SNORD71-201 snoRNA spleen (Tissue)