ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 1681.00 1.56 6.84 78.81 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 62362.00 97.82 253.85 100.0 SNORD37-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 939312.00 97.06 3823.61 99.4 SNORD59A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 190.00 53.67 0.77 100.0 SNORA7B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 474.00 89.77 1.93 100.0 SNORD14D-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 47.00 6.49 0.19 100.0 Y_RNA.555-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 11429.00 92.98 46.52 94.48 MIR25-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 61271.00 93.54 249.41 97.59 MIR99B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 8751.00 33.34 35.62 79.68 MIR23B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 16798.00 64.00 68.38 84.46 MIR23B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 71.00 71.00 0.29 100.0 MIR203A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 6220.00 85.42 25.32 90.71 MIR199B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 250.00 3.43 1.02 100.0 MIR199B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1669.00 95.97 6.79 100.0 MIR30B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1691.00 95.81 6.88 100.0 MIR181D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 2.00 100.00 0.01 100.0 MIR508-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 74.00 92.50 0.30 100.0 MIR215-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 894.00 0.60 3.64 100.0 MIR181A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 47332.00 98.43 192.67 99.24 MIR191-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 43.00 76.79 0.18 81.13 MIR149-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 72.00 4.24 0.29 100.0 MIR181C-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1577.00 92.76 6.42 99.0 MIR181C-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 31.00 81.58 0.13 100.0 MIR194-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 296.00 81.54 1.20 82.68 MIR128-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1013.00 78.83 4.12 88.63 MIR99A-201 miRNA esophagus muscularis mucosa (Tissue)