ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2016.00 0.37 8.21 83.65 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 6688.00 1.24 27.22 100.0 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 483650.00 89.44 1968.77 92.28 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 27.00 42.86 0.11 100.0 MIR183-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2866.00 9.47 11.67 100.0 MIR145-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 22533.00 74.42 91.72 100.0 MIR145-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 6782.00 97.11 27.61 98.58 MIR186-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 2.00 50.00 0.01 100.0 MIR200B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 112.00 33.14 0.46 100.0 MIR218-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 9212.00 92.49 37.50 96.21 MIR181B2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 788885.00 87.27 3211.27 87.97 MIR10B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 171.26 61.83 0.70 67.43 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 19.00 6.86 0.08 100.0 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 53.21 19.21 0.22 52.68 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 759.00 9.64 3.09 100.0 MIR199A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 2.00 100.00 0.01 100.0 MIR487B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1028.57 65.47 4.19 67.94 MIR93-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 445.88 28.38 1.82 32.17 MIR93-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 728.00 85.05 2.96 91.0 MIR532-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 37.00 77.08 0.15 100.0 MIR15B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 228.00 81.43 0.93 100.0 MIR150-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 27.00 64.29 0.11 100.0 MIR542-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 20.00 4.65 0.08 100.0 MIR500A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 245.00 56.98 1.00 100.0 MIR500A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 11471.00 8.15 46.69 80.8 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)