ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 8032.00 48.71 32.70 100.0 SNORD114-22-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 6390.00 81.09 26.01 100.0 SNORD6-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 243.00 3.08 0.99 100.0 SNORD6-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 150.00 4.52 0.61 100.0 RNY3-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 146.00 0.58 0.59 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 5014.37 20.08 20.41 64.81 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 7730.00 30.95 31.47 99.13 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 910.00 3.64 3.70 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 3465.00 13.87 14.10 90.47 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2741.08 10.98 11.16 35.43 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1950.00 7.81 7.94 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 3254.00 94.73 13.25 97.51 MIR146B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 122.00 49.39 0.50 100.0 SNHG20-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 2.00 0.56 0.01 100.0 ATP5MK-205 protein coding esophagus muscularis mucosa (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 82.00 23.10 0.33 100.0 ATP5MK-205 protein coding esophagus muscularis mucosa (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 6.00 11.11 0.02 100.0 LINC01556-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 127.00 54.27 0.52 100.0 ATAD3A-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 3.00 7.50 0.01 23.08 TMC5-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 38.00 76.00 0.15 100.0 ZMYM2-203 protein coding esophagus muscularis mucosa (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 46.00 1.15 0.19 100.0 RNVU1-7-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 2212.00 44.69 9.00 100.0 SNORD24-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 582.00 65.76 2.37 100.0 Y_RNA.389-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 92735.00 86.09 377.49 97.97 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 809.00 0.75 3.29 100.0 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 979.00 0.91 3.99 100.0 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)