ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 86524.00 72.42 352.21 83.17 RNA5SP358-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 64.00 1.42 0.26 58.72 RNA5SP145-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 1.00 14.29 0.00 100.0 Y_RNA.105-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 17.00 1.58 0.07 100.0 RNY4P9-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 3.00 0.05 0.01 42.86 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1938.00 35.00 7.89 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 634.00 11.45 2.58 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 29.00 0.52 0.12 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 11808.00 90.44 48.07 98.68 SNORD115-18-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 71.00 3.10 0.29 100.0 RNY4P27-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 10.00 0.44 0.04 100.0 RNY4P27-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 271.00 12.94 1.10 100.0 Y_RNA.136-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 473.00 71.02 1.93 100.0 SNORD115-41-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 6.00 2.42 0.02 100.0 SNORD115-5-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 58.00 46.03 0.24 100.0 SNORD115-33-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 4467.00 93.98 18.18 98.81 SNORD114-25-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1631.00 93.25 6.64 100.0 SNORD113-7-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 44.00 31.88 0.18 100.0 SNORD115-8-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 126.00 36.63 0.51 100.0 Y_RNA.181-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 159.00 48.62 0.65 100.0 SNORD115-16-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 174.00 37.34 0.71 100.0 SNORD115-32-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 93.00 60.39 0.38 100.0 SNORD115-30-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1260.26 21.44 5.13 83.02 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 191.62 3.26 0.78 18.66 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 228.00 3.88 0.93 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)