ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 12.00 5.77 0.05 100.0 RNU5E-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 93.00 1.89 0.38 60.39 RNA5SP370-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 315.00 33.91 1.28 100.0 SNORA31-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 282.00 5.73 1.15 100.0 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 9.00 0.18 0.04 100.0 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 59.00 1.20 0.24 36.65 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 76.00 1.54 0.31 57.58 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2170.00 6.04 8.83 65.84 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 3252.00 9.06 13.24 64.41 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 670.57 1.87 2.73 52.47 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 4797.00 13.36 19.53 79.25 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2150.00 5.99 8.75 76.62 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 210.00 0.58 0.85 100.0 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 4074.00 11.35 16.58 83.55 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2489.00 6.93 10.13 68.19 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1320.18 3.68 5.37 62.04 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2278.00 6.35 9.27 66.71 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 661.53 1.84 2.69 64.1 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 30.00 0.08 0.12 100.0 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1183.89 3.30 4.82 41.82 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1525.00 4.25 6.21 31.57 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1532.00 86.31 6.24 100.0 SNORD114-14-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1315.00 2.96 5.35 100.0 SNORD104-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 462.00 1.04 1.88 100.0 SNORD104-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 1679.00 71.63 6.83 94.38 SNORD115-9-201 snoRNA esophagus muscularis mucosa (Tissue)