ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 191.62 3.26 0.78 18.66 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 228.00 3.88 0.93 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 320.00 52.29 1.30 100.0 SNORD115-42-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 7089.12 4.58 28.86 36.62 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1446.00 0.93 5.89 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 4135.00 2.67 16.83 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 529.00 0.34 2.15 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 715.00 0.46 2.91 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1855.00 1.20 7.55 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 3311.95 2.14 13.48 64.95 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 683.00 0.44 2.78 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2907.85 1.88 11.84 50.34 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 2062.00 44.14 8.39 100.0 SNORD114-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 2077.00 44.46 8.45 100.0 SNORD114-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 5260.00 37.00 21.41 100.0 Y_RNA.234-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 2055.00 1.62 8.37 100.0 RNA5S9-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 65.00 84.42 0.26 100.0 SNORD115-23-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 78.00 2.94 0.32 100.0 RNA5SP141-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 293.00 81.62 1.19 100.0 SNORD114-15-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 52.00 24.41 0.21 100.0 ENST00000364722 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 514.00 59.56 2.09 100.0 SNORD115-15-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 102.00 42.68 0.42 100.0 SNORD113-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 4650.00 81.28 18.93 100.0 SNORD52-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2761.00 53.02 11.24 80.03 SNORD117-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 689.00 13.23 2.80 28.17 SNORD117-201 snoRNA esophagus muscularis mucosa (Tissue)