ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 181.00 11.06 0.74 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 109.00 6.66 0.44 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 121.00 7.40 0.49 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 201.00 12.29 0.82 63.21 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 359.00 0.22 1.46 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 201.00 35.14 0.82 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 551.00 8.14 2.24 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 14.00 0.21 0.06 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1007.00 90.07 4.10 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 281.00 68.37 1.14 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 88.00 23.66 0.36 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 214.00 0.48 0.87 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 2681.00 6.01 10.91 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 42.00 0.09 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 205.00 0.46 0.83 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 254.00 0.57 1.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 23.00 0.05 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2990.00 1.82 12.17 92.48 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 83.00 0.05 0.34 51.23 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 93.00 0.06 0.38 80.87 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 439.00 21.03 1.79 74.66 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 657.00 94.13 2.67 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 978.00 45.47 3.98 69.46 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 35.00 89.74 0.14 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 1.00 0.01 0.00 0.42 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus muscularis mucosa (Tissue)