ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 235.00 2.57 0.96 99.58 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 3369.00 36.86 13.71 82.39 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 581.65 26.88 2.37 79.35 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 282.00 13.03 1.15 86.77 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 184.93 8.55 0.75 28.76 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 30173.00 86.39 122.82 89.17 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 64.00 2.25 0.26 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 3790.00 31.54 15.43 58.71 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 66.00 0.15 0.27 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 330.00 0.31 1.34 77.65 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 981.00 50.10 3.99 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 93.00 1.51 0.38 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 43922.00 96.77 178.79 99.83 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 11.00 0.15 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 1318.00 17.48 5.37 75.31 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 24.00 15.38 0.10 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 34.00 5.88 0.14 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 30.00 4.37 0.12 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 6650.00 96.69 27.07 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 263.00 89.76 1.07 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 20388.00 52.47 82.99 95.72 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 328.00 0.84 1.34 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 13.00 0.03 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1182.00 41.77 4.81 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 169.00 4.87 0.69 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus muscularis mucosa (Tissue)