ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1964.00 32.24 7.99 66.83 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 1522.00 24.99 6.20 43.66 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 58.00 1.95 0.24 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2827.00 2.65 11.51 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 56818.00 53.34 231.29 90.27 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 67.00 20.30 0.27 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 9.00 0.88 0.04 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 235.00 0.53 0.96 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 97.00 1.31 0.39 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 68.00 0.92 0.28 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 130.00 1.75 0.53 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 100.00 1.35 0.41 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 913.00 12.29 3.72 96.41 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 207.00 2.79 0.84 38.05 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1142.00 9.50 4.65 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 4316.00 35.90 17.57 53.24 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 646.00 5.64 2.63 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 114.00 1.79 0.46 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 54.00 0.85 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 178.00 2.79 0.72 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 149.00 2.34 0.61 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 3739.00 58.69 15.22 90.01 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 518.00 4.63 2.11 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 2286.00 39.87 9.31 87.55 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 134.00 1.27 0.55 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA esophagus muscularis mucosa (Tissue)