ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1602.70 0.05 6.52 41.82 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 2061.83 0.06 8.39 36.98 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 6110.00 0.18 24.87 82.29 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 400.00 0.01 1.63 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 477.00 82.96 1.94 83.83 MIR155HG-205 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 36.00 80.00 0.15 100.0 ENST00000784740 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 64.00 2.09 0.26 100.0 ENST00000785178 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 204.00 4.76 0.83 69.86 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1280.00 29.84 5.21 100.0 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 88.00 2.05 0.36 39.29 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 221.00 9.98 0.90 87.01 ENST00000788343 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2705.19 34.42 11.01 52.19 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2065.96 26.29 8.41 39.86 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 808.00 10.28 3.29 89.98 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 136873.00 86.92 557.16 94.0 MIR181A1HG-212 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 191.00 0.12 0.78 100.0 MIR181A1HG-212 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 34.00 36.17 0.14 100.0 C19orf48P-218 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 25.00 26.60 0.10 100.0 C19orf48P-218 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1993.00 75.15 8.11 94.01 SNHG18-220 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 205.00 18.27 0.83 100.0 ENST00000817026 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 67.82 0.96 0.28 56.51 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 14.00 0.20 0.06 100.0 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 88.68 1.25 0.36 52.16 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 42.00 0.59 0.17 100.0 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 1262.00 17.86 5.14 99.61 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)