ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 699.00 26.39 2.85 100.0 ENST00000760093 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 72.00 2.72 0.29 100.0 ENST00000760093 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 172778.00 94.76 703.32 97.07 SNHG14-356 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 3094.00 21.18 12.59 86.79 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 47.00 0.32 0.19 100.0 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 17.00 0.12 0.07 100.0 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 3294.00 22.55 13.41 74.69 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1717.00 94.76 6.99 100.0 EHBP1-AS1-210 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 483.00 23.84 1.97 100.0 ENST00000770398 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 258.00 12.73 1.05 100.0 ENST00000770398 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 830.00 40.97 3.38 100.0 ENST00000770398 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 321.00 1.54 1.31 100.0 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 52.00 0.25 0.21 100.0 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 17448.00 83.86 71.02 97.04 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 201.00 0.97 0.82 100.0 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 932.00 57.53 3.79 100.0 ENST00000772672 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 13.00 0.80 0.05 100.0 ENST00000772672 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 231.00 21.81 0.94 100.0 ENST00000773843 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 76.00 0.01 0.31 100.0 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 453568.00 38.23 1846.32 87.46 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 729322.00 61.47 2968.81 98.91 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 37413.00 1.11 152.30 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 3254180.00 96.43 13246.62 98.41 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 511.00 0.02 2.08 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 1270.14 0.04 5.17 39.19 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)