ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2513.00 75.58 10.23 100.0 MIR140-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 232.00 38.41 0.94 67.64 MIR106B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 13.00 2.15 0.05 100.0 MIR106B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 69755.00 49.57 283.95 96.45 SNORD83A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 68069.00 48.37 277.08 96.32 SNORD83A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1504.00 68.55 6.12 100.0 SNORD41-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 4458.00 29.24 18.15 57.43 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 274.00 1.80 1.12 100.0 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 651.00 4.27 2.65 63.82 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 982.00 27.99 4.00 100.0 MT-TV-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 289.00 2.30 1.18 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 405.00 3.23 1.65 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 57.00 0.45 0.23 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 156.00 1.24 0.64 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1516.00 12.09 6.17 86.68 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 27.00 0.22 0.11 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 749.00 5.97 3.05 80.11 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 855.00 42.12 3.48 100.0 MT-TI-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 385.00 18.97 1.57 96.73 MT-TI-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 12274.76 18.34 49.97 57.03 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 69.00 0.10 0.28 100.0 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 37334.00 55.78 151.97 91.82 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 7081.13 10.58 28.82 55.05 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 729.00 18.54 2.97 100.0 MT-TM-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 701.00 17.83 2.85 41.65 MT-TM-201 Mt tRNA esophagus muscularis mucosa (Tissue)