ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 11439.00 8.13 46.56 100.0 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 740.00 0.53 3.01 100.0 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 11471.00 8.15 46.69 80.8 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 284160.00 91.34 1156.72 94.44 MIR27B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 2856.00 0.92 11.63 100.0 MIR27B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 1.00 100.00 0.00 100.0 MIR196A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 53.00 72.60 0.22 91.38 MIR654-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 249.00 95.40 1.01 99.2 MIR204-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 3053.00 93.31 12.43 100.0 MIR152-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 1.00 33.33 0.00 100.0 MIR138-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1786.00 85.17 7.27 100.0 MIR30C1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 20.00 55.56 0.08 100.0 MIR660-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 2026.00 10.84 8.25 100.0 MIR125B1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 12246.00 65.55 49.85 86.08 MIR125B1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 2.00 28.57 0.01 100.0 MIR493-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 3.00 42.86 0.01 100.0 MIR493-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 5246.87 36.45 21.36 40.14 MIR182-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 5435.57 37.77 22.13 40.3 MIR182-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 42304.00 93.67 172.20 95.25 MIR100-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 263.00 93.93 1.07 100.0 MIR301A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 9933.00 94.92 40.43 97.81 MIR130A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 477.00 4.56 1.94 45.47 MIR130A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 430775.00 98.40 1753.53 99.06 MIRLET7F2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 126.00 83.44 0.51 100.0 MIR652-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 3.00 75.00 0.01 100.0 MIR653-201 miRNA esophagus muscularis mucosa (Tissue)