ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 165.00 19.98 0.67 100.0 MT-TC-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 39707.00 48.58 161.63 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 19537.00 23.90 79.53 88.16 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 146.00 0.18 0.59 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 1286.00 1.57 5.23 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 13109.00 16.04 53.36 89.14 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 154.00 0.19 0.63 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 170.00 57.63 0.69 100.0 MT-TD-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 75.00 0.13 0.31 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 28021.00 48.80 114.06 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 203.00 0.35 0.83 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 24103.00 41.98 98.11 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 300.00 9.78 1.22 100.0 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 51.00 1.66 0.21 100.0 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 251.00 8.18 1.02 86.55 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 217.00 12.89 0.88 100.0 MT-TL2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 69.00 0.02 0.28 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 238198.00 80.95 969.62 89.85 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 2265.00 0.77 9.22 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 227.00 0.08 0.92 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 1614.00 0.55 6.57 78.2 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 450.00 0.15 1.83 24.77 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1138.00 0.39 4.63 85.18 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 224.00 6.52 0.91 100.0 MT-RNR1-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 513.00 14.94 2.09 100.0 MT-RNR1-201 Mt rRNA esophagus muscularis mucosa (Tissue)