ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 9.00 5.26 0.03 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 129.00 75.44 0.47 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 267.00 0.52 0.97 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 7996.00 15.42 29.08 85.05 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 38181.00 73.65 138.88 96.45 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 3429.00 6.61 12.47 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1014.00 0.67 3.69 100.0 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 138527.00 91.67 503.88 94.47 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 35.00 67.31 0.13 100.0 MIR196A2-201 miRNA sigmoid colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 61.00 67.78 0.22 79.22 MIR654-201 miRNA sigmoid colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 196.00 95.61 0.71 98.49 MIR204-201 miRNA sigmoid colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 2406.00 94.28 8.75 100.0 MIR152-201 miRNA sigmoid colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 14.00 100.00 0.05 100.0 MIR138-1-201 miRNA sigmoid colon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 2618.00 88.12 9.52 100.0 MIR30C1-201 miRNA sigmoid colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 35.00 71.43 0.13 100.0 MIR660-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 8917.00 74.71 32.43 84.18 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 636.00 5.33 2.31 100.0 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 15.00 45.45 0.05 100.0 MIR493-201 miRNA sigmoid colon (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 13.00 39.39 0.05 100.0 MIR493-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 340.33 40.66 1.24 43.58 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 276.20 33.00 1.00 37.73 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 10257.00 88.44 37.31 90.32 MIR100-201 miRNA sigmoid colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 307.00 97.15 1.12 100.0 MIR301A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 8055.00 90.77 29.30 96.14 MIR130A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 759.00 8.55 2.76 48.31 MIR130A-201 miRNA sigmoid colon (Tissue)