ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 158708.00 98.00 577.28 98.8 MIRLET7F2-201 miRNA sigmoid colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 91.00 71.65 0.33 100.0 MIR652-201 miRNA sigmoid colon (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 2.00 100.00 0.01 100.0 MIR653-201 miRNA sigmoid colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2932.00 77.44 10.66 100.0 MIR140-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 163.00 35.67 0.59 69.96 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 13.00 2.84 0.05 100.0 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 7952.00 79.09 28.92 100.0 SNORD41-201 snoRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 2196.00 35.21 7.99 68.52 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 189.00 3.03 0.69 100.0 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 398.00 6.38 1.45 71.45 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1236.00 32.69 4.50 100.0 MT-TV-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 599.00 6.21 2.18 74.13 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 29.00 0.30 0.11 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 313.00 3.25 1.14 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1337.00 13.86 4.86 85.93 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 25.00 0.26 0.09 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 80.00 0.83 0.29 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 2.00 0.02 0.01 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 659.00 41.71 2.40 94.14 MT-TI-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 264.00 16.71 0.96 100.0 MT-TI-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 4761.18 15.33 17.32 50.57 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 42.00 0.14 0.15 100.0 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 16574.00 53.37 60.29 90.15 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 3927.30 12.65 14.29 63.46 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 2029.00 36.90 7.38 66.33 MT-TM-201 Mt tRNA sigmoid colon (Tissue)