ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 38.00 76.00 0.14 100.0 MIR194-1-201 miRNA sigmoid colon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 193.00 84.65 0.70 85.02 MIR128-2-201 miRNA sigmoid colon (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1710.00 83.91 6.22 88.88 MIR99A-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2225.00 0.63 8.09 87.32 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 320149.00 90.08 1164.50 92.71 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 3108.00 0.87 11.30 100.0 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 1.00 12.50 0.00 100.0 MIR183-201 miRNA sigmoid colon (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1634.00 4.89 5.94 100.0 MIR145-201 miRNA sigmoid colon (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 28789.00 86.18 104.72 100.0 MIR145-201 miRNA sigmoid colon (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 6605.00 97.48 24.02 98.66 MIR186-201 miRNA sigmoid colon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 3.00 60.00 0.01 100.0 MIR200B-201 miRNA sigmoid colon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 64.00 27.12 0.23 100.0 MIR218-1-201 miRNA sigmoid colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 4523.00 90.24 16.45 94.17 MIR181B2-201 miRNA sigmoid colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1906460.00 86.32 6934.53 86.86 MIR10B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 50.24 51.26 0.18 54.02 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 4.00 4.08 0.01 100.0 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 33.15 33.82 0.12 57.15 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1290.00 10.93 4.69 100.0 MIR199A1-201 miRNA sigmoid colon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 5.00 45.45 0.02 100.0 MIR487B-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 408.00 33.55 1.48 37.43 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 763.97 62.83 2.78 65.13 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 501.00 89.15 1.82 95.61 MIR532-201 miRNA sigmoid colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 72.00 71.29 0.26 100.0 MIR15B-201 miRNA sigmoid colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 271.00 79.24 0.99 100.0 MIR150-201 miRNA sigmoid colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 3.00 30.00 0.01 100.0 MIR542-201 miRNA sigmoid colon (Tissue)