ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 95.00 3.70 0.35 100.0 RNVU1-7-201 snRNA sigmoid colon (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 278.00 65.26 1.01 100.0 Y_RNA.389-201 misc RNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 3.00 0.00 0.01 0.45 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 103879.00 96.97 377.85 99.83 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 85.00 0.08 0.31 100.0 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 539.00 0.50 1.96 100.0 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 40706.00 97.18 148.06 100.0 SNORD37-201 snoRNA sigmoid colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 326562.00 98.44 1187.83 100.0 SNORD59A-201 snoRNA sigmoid colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 594.00 65.71 2.16 100.0 SNORA7B-201 snoRNA sigmoid colon (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 32.00 7.77 0.12 100.0 Y_RNA.555-201 misc RNA sigmoid colon (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 9623.00 93.92 35.00 95.38 MIR25-201 miRNA sigmoid colon (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 30004.00 94.65 109.14 98.63 MIR99B-201 miRNA sigmoid colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 10390.00 54.16 37.79 76.25 MIR23B-201 miRNA sigmoid colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 8279.00 43.15 30.11 79.54 MIR23B-201 miRNA sigmoid colon (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 14.00 28.00 0.05 100.0 MIR203A-201 miRNA sigmoid colon (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 8797.00 82.99 32.00 87.26 MIR199B-201 miRNA sigmoid colon (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 208.00 1.96 0.76 100.0 MIR199B-201 miRNA sigmoid colon (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 2303.00 93.28 8.38 100.0 MIR30B-201 miRNA sigmoid colon (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1170.00 95.59 4.26 100.0 MIR181D-201 miRNA sigmoid colon (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 18.00 100.00 0.07 100.0 MIR215-201 miRNA sigmoid colon (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 853.00 1.16 3.10 100.0 MIR181A2-201 miRNA sigmoid colon (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 48584.00 98.93 176.72 99.44 MIR191-201 miRNA sigmoid colon (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 107.00 87.70 0.39 91.45 MIR149-201 miRNA sigmoid colon (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1765.00 93.34 6.42 98.49 MIR181C-201 miRNA sigmoid colon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 64.00 3.38 0.23 100.0 MIR181C-201 miRNA sigmoid colon (Tissue)