ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 9020.00 91.97 32.81 98.41 SNORD114-20-201 snoRNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 35.00 1.15 0.13 100.0 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 654.00 21.44 2.38 63.8 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 656.00 21.50 2.39 90.98 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 448.00 14.68 1.63 87.33 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 603.00 68.99 2.19 100.0 RNA5SP77-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 16254.00 49.66 59.12 100.0 SNORD114-22-201 snoRNA sigmoid colon (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 15300.00 46.75 55.65 97.93 SNORD114-22-201 snoRNA sigmoid colon (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 661.00 5.24 2.40 100.0 SNORD6-201 snoRNA sigmoid colon (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 10660.00 84.58 38.77 100.0 SNORD6-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 103.00 0.29 0.37 100.0 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 8801.00 25.20 32.01 98.04 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1626.00 4.66 5.91 100.0 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 6075.00 17.39 22.10 89.73 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4798.42 13.74 17.45 34.53 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 8732.68 25.00 31.76 62.83 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 833.00 2.38 3.03 100.0 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 7333.00 92.66 26.67 95.63 MIR146B-201 miRNA sigmoid colon (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 108.00 60.34 0.39 100.0 SNHG20-201 lncRNA sigmoid colon (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 2.00 1.01 0.01 100.0 ATP5MK-205 protein coding sigmoid colon (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 29.00 14.65 0.11 100.0 ATP5MK-205 protein coding sigmoid colon (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 1.00 2.27 0.00 100.0 LINC01556-201 lncRNA sigmoid colon (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 214.00 55.15 0.78 100.0 ATAD3A-202 protein coding sigmoid colon (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 8.00 5.93 0.03 15.69 TMC5-202 protein coding sigmoid colon (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 4.00 26.67 0.01 100.0 ZMYM2-203 protein coding sigmoid colon (Tissue)