ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 207.00 12.20 0.75 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 76.00 4.48 0.28 60.32 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 275.00 0.07 1.00 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 481.00 42.53 1.75 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 5.00 2.54 0.02 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 574.00 13.53 2.09 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 38.00 0.90 0.14 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 4859.00 94.42 17.67 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 426.00 79.63 1.55 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 225.00 53.96 0.82 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 263.00 0.79 0.96 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1687.00 5.05 6.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 148.00 0.44 0.54 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 127.00 0.38 0.46 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 145.00 0.43 0.53 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 61.00 0.18 0.22 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 112.00 0.03 0.41 67.88 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 152.00 0.04 0.55 60.32 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 12615.00 3.31 45.89 92.42 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 765.00 23.38 2.78 75.82 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 1800.00 97.46 6.55 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 761.00 40.50 2.77 62.48 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 70.00 98.59 0.25 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1024.00 5.83 3.72 94.2 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 63.00 0.36 0.23 5.8 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)