ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 8710.00 49.56 31.68 85.82 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 980.75 44.89 3.57 74.3 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 360.66 16.51 1.31 30.03 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 69.00 3.16 0.25 71.88 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 101298.00 95.52 368.46 96.76 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 158.00 8.18 0.57 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 2651.00 33.00 9.64 62.29 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 73.00 0.08 0.27 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 246.00 0.11 0.89 67.4 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1022.00 61.60 3.72 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 106.00 2.98 0.39 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 93402.00 97.83 339.74 99.9 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 9.00 0.10 0.03 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 2184.00 23.30 7.94 77.56 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 48.00 26.52 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 34.00 6.80 0.12 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 47.00 5.30 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 9816.00 96.87 35.70 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 603.00 95.26 2.19 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 17773.00 59.81 64.65 95.16 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 117.00 0.39 0.43 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 63.00 0.07 0.23 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 701.00 50.40 2.55 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 62.00 2.60 0.23 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 87.00 3.25 0.32 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA sigmoid colon (Tissue)